<?php
// Remove empty facet choices, if you can't find the root cause.
// Re-index after adding this snippet.
add_filter( 'facetwp_index_row', function( $params, $class ) {
if ( '' == $params['facet_display_value'] ) {
$params['facet_value'] = ''; // Skip indexing
}
return $params;
}, 10, 2 );